Uses of Class
BioinfoFieldExtractor.NeedlemanWunschHolder

Packages that use NeedlemanWunschHolder

BioinfoFieldExtractor

Uses of NeedlemanWunschHolder in BioinfoFieldExtractor

Methods in BioinfoFieldExtractor that return NeedlemanWunschHolder

NeedlemanWunschHolder	GlobalAlignment.alignGlobally(java.util.ArrayList<java.lang.Integer> msg1, java.util.ArrayList<java.lang.Integer> msg2)
NeedlemanWunschHolder	GlobalAlignment.alignGlobally(java.util.ArrayList<java.lang.Integer> msg1, java.util.ArrayList<java.lang.Integer> msg2, float[][] similarityMatrix) Converts the strings into a byte array and calls the main alignGlobaly method.
NeedlemanWunschHolder	GlobalAlignment.alignGlobally(int[] msg1, int[] msg2, float[][] similarityMtx) Performs NeedlemanWunsch global alignment algorithm to calculate similarity between message sequences.