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Class Summary |
| ASCIIconverter |
This class provides methods allowing to convert strings to decimal
representation and vice-versa. |
| BioTester |
|
| ConsensusSeq |
This is the generic class for storing a consensus sequence. |
| GenericSeqConstructor |
This class provides functionality to extract primitive type
from a sample of data values. |
| GenericSequence |
This class is a replacement of ConsensusSeq class. |
| GlobalAlignment |
This class provides functionality for global alignment for 2 messages sequences
based on the NeedlemanWunsch algorithm. |
| LocalAlignment |
|
| MultiSequenceAligner |
This class provides functionality allowing to align multiple messages
using the global alignment techniques. |
| NeedlemanWunschHolder |
|
| PhylogenTree |
This is a generic class implementing a phylogenetic tree. |
| UPGMA |
This class is the standard implementation of
Unweighted Pair Group Method with Arithmetic mean, also known as average linkage method. |